{"id":362,"date":"2016-07-11T15:20:43","date_gmt":"2016-07-11T18:20:43","guid":{"rendered":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/?page_id=362"},"modified":"2016-11-04T09:42:31","modified_gmt":"2016-11-04T12:42:31","slug":"satellite-event","status":"publish","type":"page","link":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/satellite-event\/","title":{"rendered":"Satellite Event"},"content":{"rendered":"<p style=\"text-align: justify;\"><a href=\"http:\/\/proteomics.fiocruz.br\/\"><img loading=\"lazy\" decoding=\"async\" class=\"size-medium wp-image-364 alignright\" src=\"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-content\/uploads\/sites\/20\/2016\/07\/fiocruz-300x300.jpg\" alt=\"fiocruz\" width=\"300\" height=\"300\" srcset=\"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-content\/uploads\/sites\/20\/2016\/07\/fiocruz-300x300.jpg 300w, http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-content\/uploads\/sites\/20\/2016\/07\/fiocruz-150x150.jpg 150w, http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-content\/uploads\/sites\/20\/2016\/07\/fiocruz.jpg 640w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a>The attendees\u00a0of the VII Proteomics Workshop are invited to apply to the <strong>&#8220;Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0&#8221;<\/strong> course. This event will be held from November 10th and 11th, from 9:00am to 5:00pm, as a satellite event of the Proteomics Workshop.<\/p>\n<p style=\"text-align: justify;\">The participants of the satellite event must bring to the course their personal computers with Windows Operating System.<\/p>\n<p style=\"text-align: justify;\">In this course we will learn how to perform protein identification and quantitative proteomics through XIC, spectral counting, and isobaric markers (e.g., TMT \/ iTRAQ).\u00a0 For this, we will use PatternLab for Proteomics 4.0 (PL), an integrated computational environment for analyzing shotgun proteomic data.\u00a0 PL contains modules for formatting sequence databases, performing peptide spectrum matching, statistically filtering and organizing shotgun proteomic data, extracting quantitative information from label-free and chemically labeled data, performing statistics for differential proteomics, displaying results in a variety of graphical formats, performing similarity-driven studies with\u00a0de novo\u00a0sequencing data, analyzing time-course experiments, and helping with the understanding of the biological significance of data in the light of the Gene Ontology. PL\u00a0closely knits together all these modules in a self-contained environment, covering the principal aspects of proteomic data analysis as freely available and easily installable software (<a href=\"http:\/\/www.patternlabforproteomics.org\">www.patternlabforproteomics.org<\/a>).<\/p>\n<p style=\"text-align: justify;\">PatternLab is user-friendly, simple and provides a graphical user interface.<\/p>\n<p style=\"text-align: justify;\">For more information, <a href=\"http:\/\/proteomics.fiocruz.br\/\"><strong>click here<\/strong><\/a>.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The attendees\u00a0of the VII Proteomics Workshop are invited to apply to the &#8220;Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0&#8221; course. This event will be held from November 10th and 11th, from 9:00am to 5:00pm, as a satellite event of the Proteomics Workshop. The participants of the satellite event must bring to&hellip;<\/p>\n","protected":false},"author":8,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-362","page","type-page","status-publish","hentry","description-off"],"_links":{"self":[{"href":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-json\/wp\/v2\/pages\/362","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-json\/wp\/v2\/users\/8"}],"replies":[{"embeddable":true,"href":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-json\/wp\/v2\/comments?post=362"}],"version-history":[{"count":0,"href":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-json\/wp\/v2\/pages\/362\/revisions"}],"wp:attachment":[{"href":"http:\/\/pages.cnpem.br\/proteomicsworkshop\/wp-json\/wp\/v2\/media?parent=362"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}