VII Proteomics Workshop
The VII Proteomics Workshop will be held by the Brazilian Biosciences National Laboratory (LNBio) at the Brazilian Center for Research in Energy and Materials (CNPEM) Campus in Campinas-SP from 8th to 9th November 2016.
The event is focused on highlighting the recent developments and state-of-the-art of Mass Spectrometry-Based Proteomics. It will be divided in two-day workshop and a variety of lecturers will cover a diverse array of applications and it will be informal with time for discussion and questions.
This meeting represents a training opportunity for current and future users of the LNBio´s Mass Spectrometry Facilitiy and for researchers in the area of proteomics and mass spectrometry. It also promotes the exchange of scientific information, as well as it incentives the formation of new research groups in these thematic areas.
Following the example of the previous editions, held in the last six years, the workshop also promote the exchange of new technologies, the closer relationship between Brazilian and international researchers and dissemination of knowledge in the scientific community.
The VII Proteomics Workshop registration fee is mandatory for all participants. The registration fee includes all lectures, poster session, conference materials, coffee breaks and lunches on 8th and 9th November.
Details about the registration and the payment procedures are available on “Information for participants“.
VII Proteomics Workshop Deadlines | |
Applications | From September 12th to October 10th* |
Releasing of confirmed applicants | October 14th |
Waiting list call | October 20th |
Workshop | From 8th to 9th November |
*Applications will be closed before October 10th if we receive 110 participants before this date |
The attendees of the VII Proteomics Workshop are invited to apply to the “Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0”course. This event will be held from November 10th to 11th, as a satellite event of the Proteomics Workshop. If you are interested in this initiative should fill the VII Proteomics Workshop registration form, available on the application page. Detailed information about the satellite event is available here.
Program
8th November 2016 | Tutorial Lectures |
|
9:00-9:30 | WelcomeDr. Kleber Franchini, LNBio Director |
9:40-10:10 | Top-Down ProteomicsLjiljana Pasa Tolic, Pacific Northwest National Laboratory, Richland, WA, USA |
10:20-10:50 | Membrane Proteomics: Surface Markers & Horizontal SignallingThomas Kislinger, University of Toronto, Toronto, Canada |
11:00-11:30 | Coffee break |
11:40-12:10 | Proteomic analysis of biotechnological targets: focus on castor oil seedsFabio Nogueira, UFRJ, Rio de Janeiro |
12:20-12:50 | Peptidomics of Acanthoscurria gomesiana spider venom reveals new toxins with potential antimicrobial activityAlexandre Tashima, UNIFESP, São Paulo |
1:00-2:30 | Lunch |
2:30-3:00 | Social Network Architecture of Human Immune Cells defined by Quantitative ProteomicsFelix Meissner, Max Planck Institute of Biochemistry, Munich, Germany |
3:10-3:40 | MSstatsQC: Longitudinal system suitability monitoring tools for LC MS/MS proteomic experimentsEralp DOGU, Northeastern University, Boston, MA, USA |
3:50-4:00 | Partnership Presentation IonKey MS: Increasing Sensitivity and Simplicity with Microscale UPLC Alexandre Gomes Waters Technologies |
4:10-4:40 | Quantification Strategies for Proteins containing Posttranslational ModificationsBirgit Schilling, San Francisco State University, Novato, CA, USA |
4:50-5:50 | Poster Session & Coffee break |
6:00-7:00 | Welcome cocktail |
9th November, 2016 | Advanced Lectures |
|
9:00-9:30 | Top-Down ProteomicsLjiljana Pasa Tollic, Pacific Northwest National Laboratory, Richland, WA, USA |
9:40-10:10 | Membrane Proteomics: Surface Markers & Horizontal SignallingThomas Kislinger, University of Toronto, Toronto, Canada |
10:20-10:50 | Coffee break |
11:00-11:30 | Quantification Strategies for Proteins containing Posttranslational ModificationsBirgit Schilling, San Francisco State University, Novato, CA, USA |
11:40-12:10 | PatternLab for proteomics 4.0: A one-stop shop for analyzing shotgun proteomic dataPaulo Carvalho, Fiocruz, Curitiba
|
12:20-12:50 | Poster session |
1:00-2:30 | Lunch |
2:30-3:00 | The Brazilian Initiative on Precision Medicine – BIPMedBenilton Carvalho, UNICAMP, Campinas
|
3:10-3:20 | Partnership Presentation What’s going on with the Fusion? Gabriel Duarte Thermo Fisher |
3:30-4:00 | Coffee Break |
4:10-4:40 | MSstatsQC: Longitudinal system suitability monitoring tools for LC MS/MS proteomic experimentsEralp DOGU, Northeastern University, Boston, MA, USA |
4:50-5:20 | Social Network Architecture of Human Immune Cells defined by Quantitative ProteomicsFelix Meissner, Max Planck Institute of Biochemistry, Munich, Germany |
5:30-5:40 | Closing Remarks |
Speakers
Alexandre Tashima
UNIFESP, São Paulo, Brazil
Benilton Carvalho
UNICAMP, Campinas, Brazil
Birgit Schilling
Buck Institute for Research on Aging, Novato, California, USA
Eralp DOGU
Northeastern University, Boston, MA, USA
Fabio Nogueira
UFRJ, Rio de Janeiro, Brazil
Felix Meissner
Max Planck Institute of Biochemistry, Munich, Germany
Ljiljana Pasa Tollic
Pacific Northwest National Laboratory, Richland, WA, USA
Paulo Carvalho
Fiocruz, Curitiba, Brazil
Reinhold Vern
University of New Hampshire, Durham, NH, USA
Thomas Kislinger
University of Toronto, Toronto, Canada
Information for participants
How to apply
- The applicant should fill the registration form that is available on the application page;
- The applicant that has fellowship must submit an abstract to present the research subject or results during the poster sessions;
- The registration period is from September 12th to October 10th. Applications will be closed before October 10th if we receive 110 participants before this date;
- After submitting the application form, all the applicants will receive an e-mail with the banking information to proceed with the wire transfer. This procedure must be done within two days after the application submission otherwise, the registration will be canceled. Those participants that will attend the Satellite Event on November 10th and 11th must pay both events registration fees at the same time;
- The VII Proteomics Workshop registration fee is mandatory for all participants:
Undergraduate students; Technicians, Masters, PhD…….…..R$ 110,00
Post-doc in progress, post-doc degree and professionals……R$ 200,00
Satellite Event (Nov 10th and 11th)…………………………………..R$ 100,00
- After the registration and the payment procedures, the applicants must send the payment proof to eventos@cnpem.br within two days after the application submission;
- Once the payment is done and the Organizing Committee had received your payment proof your registration is confirmed.
- On October 14th, the confirmed applicants list will be published on this website;
General Information
- The lectures are going to be held in the Brazilian Synchrotron Light Laboratory Auditorium;
- The registration fee includes all lectures, poster session, conference materials, coffee breaks and lunches on 8th and 9th November.
- There is no grant to transport and accommodation;
- The Workshops official language is English;
- The Workshop certificates are going to be available after the last talk.
- Workshop contact: eventos@cnpem.br
- Visit the Mass Spectrometry Facility website: http://lnbio.cnpem.br/massspectrometry/
Satellite Event
- The attendees of the VII Proteomics Workshop are invited to apply to the “Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0”course. Detailed information about the satellite event is available here;
- This event will be held from November 10th to 11th, as a satellite event of the Proteomics Workshop;
- If you are interested in this initiative you should fill the VII Proteomics Workshop registration form, available on the application page;
- Those participants that will attend the Satellite Event must pay both events registration fees at the same time, within two day after submitting the application form;
- The Sattelite Course registration fee is R$100,00 for all categories.
Events Location
CNPEM – Brazilian Center for Research in Energy and Materials
Rua Giuseppe Máximo Scolfaro, 10000
Pólo II de Alta Tecnologia de Campinas
Campinas – SP – Brazil
Phone: +55 19 3512-1267
Google Maps
Accepted Applicants
ATTENTION: If you had submitted your application form and your name is not in the list, contact the Local Committee if you want to be part of the event.
Amanda Cristina Baldassi |
Amanda Morato do Canto |
Amanda Ribeiro Martins da Silva |
Ana Karina de Oliveira |
André Zelanis |
Andressa Bruscato |
Ariane F. Busso Lopes |
Barbara Henning Silva |
BIANCA ALVES PAULETTI |
Carolina Alves Nicolau |
Carolina Moretto Carnielli |
Catia Lie Yokoyama |
César Rivera |
Clarice Izumi |
Cláudio Rodrigues Rezende Costa |
Daiani M Vargas |
Daniel Martins-de-Souza |
daniela campos granato |
Daniela Luz Ambrosio Breisch |
Daniella Gorete Lourenço de Oliveira |
Dayene Talita Delgado de Oliveira |
Diogo Borges Lima |
Edileuza D. da Silva |
Edleusa Marques Lima Batista |
Edson Galdino do Nascimento Filho |
Elisa Castaneda Santa Cruz |
ELISETE PAINS RODRIGUES |
Eveline Soares Menezes |
FABIANA FERREIRA DE SOUZA |
Fabiano Jares Contesini |
Fabio Mitsuo Lima |
Felipe Augusto Dorr |
Fernanda Cristina Bergamo Alves |
Fernanda J. Cabral |
Flavia Vischi Winck |
Flavia Zandonadi |
Flavio de Oliveira Lima |
Florence Polegato Castelan |
Francisca Nathália de Luna Vitorino |
Gabriell Bonifácio Borgato |
Giselle Villa Flor Brunoro |
Graziella Eliza Ronsein |
Greiciely André de Oliveira |
Guilherme P. Telles |
Hélen Julie Laure |
Helena P G Joaquim |
Henrique Pellin Biasoto |
Henry Heberle |
Isadora Ferraz Semionatto |
Jamille Santos da Silva |
Joaquim Teixeira de Avelar Júnior |
Jonathas Pereira das Graças |
Jorge Hernandez Fernandez |
Jose Cesar Rosa |
José Eduardo Peixoto Santos |
Kamila de Sousa Gomes |
Katia da Conceição |
Leticia Gomes de Pontes |
Licia Carla da Silva Costa |
Lina M Marín |
Luis Fernando Sierra de Araújo |
Marcia Soares Vidal |
Maria Jose da Silva Fernandes |
Maria Priscila F. Lacerda |
Mariana Albano |
Mariana Leite Tamascia |
Marina V Navarro |
Marisol Miranda Galvis |
marriam yamin |
Monique Ramos de Oliveira Trugilho |
Muhammad Nawaz |
Natalia Carolina Moraes Ehrhardt Brocardo |
PABLO VICTOR MENDES DOS REIS |
Pamella Araujo Malagrino |
Paulo Cesar Gomes |
Priscila Robertina dos Santos Donado |
Rebeca Kawahara |
Romenia Ramos Domingues |
Rosineide Costa Simas |
Rute Alves Pereira e Costa |
Sami Yokoo |
Sergio Luiz de Almeida Rochelle |
Tanes Imamura de Lima |
Tatiane De Rossi |
Thaís Glatthardt da Silva dos Santos |
Thaisy Eliza Pacheco dos Santos |
Thiago Belchior |
Thomas M Halder |
Vitor Marcel Faça |
Weliton Pedro Batiston |
Guidelines for Posters Session
- All posters will be set-up on November 8th at 9:00am. They will be removed on November 9th at 7:00pm;
- Design as portrait posters at dimension: 90 x 120 cm (width x height); with a standard channel finishes;
- Poster should be written in English and the poster content must be related to the abstract submitted;
- There will be hangers to hang your poster;
- Each author will be provided one board to hang the poster;
- The boards will be numbered. To identify the correct board, the authors must check their abstracts numbers, which will be available soon on the “Book of abstracts”.
Abstract Book
Click on the image to open the complete PDF
Satellite Event
The attendees of the VII Proteomics Workshop are invited to apply to the “Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0” course. This event will be held from November 10th and 11th, from 9:00am to 5:00pm, as a satellite event of the Proteomics Workshop.
The participants of the satellite event must bring to the course their personal computers with Windows Operating System.
In this course we will learn how to perform protein identification and quantitative proteomics through XIC, spectral counting, and isobaric markers (e.g., TMT / iTRAQ). For this, we will use PatternLab for Proteomics 4.0 (PL), an integrated computational environment for analyzing shotgun proteomic data. PL contains modules for formatting sequence databases, performing peptide spectrum matching, statistically filtering and organizing shotgun proteomic data, extracting quantitative information from label-free and chemically labeled data, performing statistics for differential proteomics, displaying results in a variety of graphical formats, performing similarity-driven studies with de novo sequencing data, analyzing time-course experiments, and helping with the understanding of the biological significance of data in the light of the Gene Ontology. PL closely knits together all these modules in a self-contained environment, covering the principal aspects of proteomic data analysis as freely available and easily installable software (www.patternlabforproteomics.org).
PatternLab is user-friendly, simple and provides a graphical user interface.
For more information, click here.
Partnerships